Why glm make an input error on this function
0
I'm trying to run a glm in R but it results me with an error I can't figure it out how to solve:
> GLM.3 <- glm(log(Total_Pass + 1) ~ Total_Pass + Total_Buzz + dm_plant + dm_cdeagua + dm_cultivo + dm_humed + dm_bnativ + dm_snaspe + Cultivos + BosqNat + Plantac + Pastizal + Matorral + Humedal + C_agua + Sup_imper + Tie_desnud + hielo + alt_media + pend_media + Temp_media + PP_media + CA _100 + PLAND _100 + PD _100 + ED _100 + AREA_MN _100 + ENN_MN_100 + CA _210 + PLAND _210 + PD _210 + ED _210 + AREA_MN _210 + ENN_MN_210 + CA _600 + PLAND _600 + PD _600 + ED _600 + AREA_MN _600 + ENN_MN_600 + SHDI + SIDI + MSIDI + SHEI + SIEI + MSIEI, family=gaussian(identity), data=bats_araucania_500)
Error: unexpected input in "Total_Pass + Total_Buzz + dm_plant + dm_cdeagua + dm_cultivo + dm_humed + dm_bnativ + dm_snaspe + Cultivos + BosqNat + Plantac + Pastizal + Matorral + Humedal + C_agua + Sup_imper + Tie_desnud"
Any help is useful
r glm
edited Nov 21 '18 at 23:48
K.Dᴀᴠɪs
7,320112440
asked Nov 21 '18 at 16:12
Gastón Sepúlveda TruanGastón Sepúlveda Truan
52
add a comment |
0
I'm trying to run a glm in R but it results me with an error I can't figure it out how to solve:
> GLM.3 <- glm(log(Total_Pass + 1) ~ Total_Pass + Total_Buzz + dm_plant + dm_cdeagua + dm_cultivo + dm_humed + dm_bnativ + dm_snaspe + Cultivos + BosqNat + Plantac + Pastizal + Matorral + Humedal + C_agua + Sup_imper + Tie_desnud + hielo + alt_media + pend_media + Temp_media + PP_media + CA _100 + PLAND _100 + PD _100 + ED _100 + AREA_MN _100 + ENN_MN_100 + CA _210 + PLAND _210 + PD _210 + ED _210 + AREA_MN _210 + ENN_MN_210 + CA _600 + PLAND _600 + PD _600 + ED _600 + AREA_MN _600 + ENN_MN_600 + SHDI + SIDI + MSIDI + SHEI + SIEI + MSIEI, family=gaussian(identity), data=bats_araucania_500)
Error: unexpected input in "Total_Pass + Total_Buzz + dm_plant + dm_cdeagua + dm_cultivo + dm_humed + dm_bnativ + dm_snaspe + Cultivos + BosqNat + Plantac + Pastizal + Matorral + Humedal + C_agua + Sup_imper + Tie_desnud"
Any help is useful
r glm
edited Nov 21 '18 at 23:48
K.Dᴀᴠɪs
7,320112440
asked Nov 21 '18 at 16:12
Gastón Sepúlveda TruanGastón Sepúlveda Truan
52
1
Welcome to StackOverflow. See how to make a great reproducible example.
– Anonymous coward
Nov 21 '18 at 16:20
3
Do you have spaces in your column names" When you have+ CA _100 +that's not valid because of the space between the CA and _. R can't parse such a value. You'd have to surround those values in backticks. What exactly doesnames(bats_araucania_500)return?
– MrFlick
Nov 21 '18 at 16:23
as general points: that looks like a lot of covariates to be regressing against. you'll probably want to remove quite a few of them. also regressinglog(Y+1)againstYlooks very unusual, are you sure you want to be doing that?!
– Sam Mason
Nov 21 '18 at 22:19
add a comment |
0
0
0
I'm trying to run a glm in R but it results me with an error I can't figure it out how to solve:
> GLM.3 <- glm(log(Total_Pass + 1) ~ Total_Pass + Total_Buzz + dm_plant + dm_cdeagua + dm_cultivo + dm_humed + dm_bnativ + dm_snaspe + Cultivos + BosqNat + Plantac + Pastizal + Matorral + Humedal + C_agua + Sup_imper + Tie_desnud + hielo + alt_media + pend_media + Temp_media + PP_media + CA _100 + PLAND _100 + PD _100 + ED _100 + AREA_MN _100 + ENN_MN_100 + CA _210 + PLAND _210 + PD _210 + ED _210 + AREA_MN _210 + ENN_MN_210 + CA _600 + PLAND _600 + PD _600 + ED _600 + AREA_MN _600 + ENN_MN_600 + SHDI + SIDI + MSIDI + SHEI + SIEI + MSIEI, family=gaussian(identity), data=bats_araucania_500)
Error: unexpected input in "Total_Pass + Total_Buzz + dm_plant + dm_cdeagua + dm_cultivo + dm_humed + dm_bnativ + dm_snaspe + Cultivos + BosqNat + Plantac + Pastizal + Matorral + Humedal + C_agua + Sup_imper + Tie_desnud"
Any help is useful
r glm
edited Nov 21 '18 at 23:48
K.Dᴀᴠɪs
7,320112440
asked Nov 21 '18 at 16:12
Gastón Sepúlveda TruanGastón Sepúlveda Truan
52
I'm trying to run a glm in R but it results me with an error I can't figure it out how to solve:
> GLM.3 <- glm(log(Total_Pass + 1) ~ Total_Pass + Total_Buzz + dm_plant + dm_cdeagua + dm_cultivo + dm_humed + dm_bnativ + dm_snaspe + Cultivos + BosqNat + Plantac + Pastizal + Matorral + Humedal + C_agua + Sup_imper + Tie_desnud + hielo + alt_media + pend_media + Temp_media + PP_media + CA _100 + PLAND _100 + PD _100 + ED _100 + AREA_MN _100 + ENN_MN_100 + CA _210 + PLAND _210 + PD _210 + ED _210 + AREA_MN _210 + ENN_MN_210 + CA _600 + PLAND _600 + PD _600 + ED _600 + AREA_MN _600 + ENN_MN_600 + SHDI + SIDI + MSIDI + SHEI + SIEI + MSIEI, family=gaussian(identity), data=bats_araucania_500)
Error: unexpected input in "Total_Pass + Total_Buzz + dm_plant + dm_cdeagua + dm_cultivo + dm_humed + dm_bnativ + dm_snaspe + Cultivos + BosqNat + Plantac + Pastizal + Matorral + Humedal + C_agua + Sup_imper + Tie_desnud"
Any help is useful
r glm
r glm
edited Nov 21 '18 at 23:48
K.Dᴀᴠɪs
7,320112440
asked Nov 21 '18 at 16:12
Gastón Sepúlveda TruanGastón Sepúlveda Truan
52
edited Nov 21 '18 at 23:48
K.Dᴀᴠɪs
7,320112440
asked Nov 21 '18 at 16:12
Gastón Sepúlveda TruanGastón Sepúlveda Truan
52
edited Nov 21 '18 at 23:48
K.Dᴀᴠɪs
7,320112440
edited Nov 21 '18 at 23:48
K.Dᴀᴠɪs
7,320112440
edited Nov 21 '18 at 23:48
K.Dᴀᴠɪs
7,320112440
7,320112440
asked Nov 21 '18 at 16:12
Gastón Sepúlveda TruanGastón Sepúlveda Truan
52
asked Nov 21 '18 at 16:12
Gastón Sepúlveda TruanGastón Sepúlveda Truan
52
asked Nov 21 '18 at 16:12
Gastón Sepúlveda TruanGastón Sepúlveda Truan
52
52
1
Welcome to StackOverflow. See how to make a great reproducible example.
– Anonymous coward
Nov 21 '18 at 16:20
3
Do you have spaces in your column names" When you have+ CA _100 +that's not valid because of the space between the CA and _. R can't parse such a value. You'd have to surround those values in backticks. What exactly doesnames(bats_araucania_500)return?
– MrFlick
Nov 21 '18 at 16:23
as general points: that looks like a lot of covariates to be regressing against. you'll probably want to remove quite a few of them. also regressinglog(Y+1)againstYlooks very unusual, are you sure you want to be doing that?!
– Sam Mason
Nov 21 '18 at 22:19
add a comment |
1
Welcome to StackOverflow. See how to make a great reproducible example.
– Anonymous coward
Nov 21 '18 at 16:20
3
Do you have spaces in your column names" When you have+ CA _100 +that's not valid because of the space between the CA and _. R can't parse such a value. You'd have to surround those values in backticks. What exactly doesnames(bats_araucania_500)return?
– MrFlick
Nov 21 '18 at 16:23
as general points: that looks like a lot of covariates to be regressing against. you'll probably want to remove quite a few of them. also regressinglog(Y+1)againstYlooks very unusual, are you sure you want to be doing that?!
– Sam Mason
Nov 21 '18 at 22:19
1
1
Welcome to StackOverflow. See how to make a great reproducible example.
– Anonymous coward
Nov 21 '18 at 16:20
Welcome to StackOverflow. See how to make a great reproducible example.
– Anonymous coward
Nov 21 '18 at 16:20
3
3
Do you have spaces in your column names" When you have
+ CA _100 + that's not valid because of the space between the CA and _. R can't parse such a value. You'd have to surround those values in backticks. What exactly does names(bats_araucania_500) return?– MrFlick
Nov 21 '18 at 16:23
Do you have spaces in your column names" When you have
+ CA _100 + that's not valid because of the space between the CA and _. R can't parse such a value. You'd have to surround those values in backticks. What exactly does names(bats_araucania_500) return?– MrFlick
Nov 21 '18 at 16:23
as general points: that looks like a lot of covariates to be regressing against. you'll probably want to remove quite a few of them. also regressing
log(Y+1) against Y looks very unusual, are you sure you want to be doing that?!– Sam Mason
Nov 21 '18 at 22:19
as general points: that looks like a lot of covariates to be regressing against. you'll probably want to remove quite a few of them. also regressing
log(Y+1) against Y looks very unusual, are you sure you want to be doing that?!– Sam Mason
Nov 21 '18 at 22:19
add a comment |
1 Answer
1
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R can not handle column names with space: CA _210. Try to wrap these columns between two ` (backticks) or rename your columns without spaces.
FYI : If you are using all columns as predictors, you can write your code this way: glm(log(y+1) ~ . , nextargs...)
answered Nov 21 '18 at 16:36
emsinkoemsinko
18616
Yes, it was the space between characters, i redid all and run it
– Gastón Sepúlveda Truan
Nov 21 '18 at 17:07
Good, you can now close the question with accepting answer
– emsinko
Nov 21 '18 at 17:45
add a comment |
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R can not handle column names with space: CA _210. Try to wrap these columns between two ` (backticks) or rename your columns without spaces.
FYI : If you are using all columns as predictors, you can write your code this way: glm(log(y+1) ~ . , nextargs...)
answered Nov 21 '18 at 16:36
emsinkoemsinko
18616
Yes, it was the space between characters, i redid all and run it
– Gastón Sepúlveda Truan
Nov 21 '18 at 17:07
Good, you can now close the question with accepting answer
– emsinko
Nov 21 '18 at 17:45
add a comment |
0
R can not handle column names with space: CA _210. Try to wrap these columns between two ` (backticks) or rename your columns without spaces.
FYI : If you are using all columns as predictors, you can write your code this way: glm(log(y+1) ~ . , nextargs...)
answered Nov 21 '18 at 16:36
emsinkoemsinko
18616
Yes, it was the space between characters, i redid all and run it
– Gastón Sepúlveda Truan
Nov 21 '18 at 17:07
Good, you can now close the question with accepting answer
– emsinko
Nov 21 '18 at 17:45
add a comment |
0
0
0
R can not handle column names with space: CA _210. Try to wrap these columns between two ` (backticks) or rename your columns without spaces.
FYI : If you are using all columns as predictors, you can write your code this way: glm(log(y+1) ~ . , nextargs...)
answered Nov 21 '18 at 16:36
emsinkoemsinko
18616
R can not handle column names with space: CA _210. Try to wrap these columns between two ` (backticks) or rename your columns without spaces.
FYI : If you are using all columns as predictors, you can write your code this way: glm(log(y+1) ~ . , nextargs...)
answered Nov 21 '18 at 16:36
emsinkoemsinko
18616
answered Nov 21 '18 at 16:36
emsinkoemsinko
18616
answered Nov 21 '18 at 16:36
emsinkoemsinko
18616
answered Nov 21 '18 at 16:36
emsinkoemsinko
18616
18616
Yes, it was the space between characters, i redid all and run it
– Gastón Sepúlveda Truan
Nov 21 '18 at 17:07
Good, you can now close the question with accepting answer
– emsinko
Nov 21 '18 at 17:45
add a comment |
Yes, it was the space between characters, i redid all and run it
– Gastón Sepúlveda Truan
Nov 21 '18 at 17:07
Good, you can now close the question with accepting answer
– emsinko
Nov 21 '18 at 17:45
Yes, it was the space between characters, i redid all and run it
– Gastón Sepúlveda Truan
Nov 21 '18 at 17:07
Yes, it was the space between characters, i redid all and run it
– Gastón Sepúlveda Truan
Nov 21 '18 at 17:07
Good, you can now close the question with accepting answer
– emsinko
Nov 21 '18 at 17:45
Good, you can now close the question with accepting answer
– emsinko
Nov 21 '18 at 17:45
add a comment |
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1
Welcome to StackOverflow. See how to make a great reproducible example.
– Anonymous coward
Nov 21 '18 at 16:20
3
Do you have spaces in your column names" When you have
+ CA _100 +that's not valid because of the space between the CA and _. R can't parse such a value. You'd have to surround those values in backticks. What exactly doesnames(bats_araucania_500)return?– MrFlick
Nov 21 '18 at 16:23
as general points: that looks like a lot of covariates to be regressing against. you'll probably want to remove quite a few of them. also regressing
log(Y+1)againstYlooks very unusual, are you sure you want to be doing that?!– Sam Mason
Nov 21 '18 at 22:19