escape=F kable pdf not compiling
I am trying to include m\textsubscript{2}
in a column name using kable
. When I change escape=F
to allow this to occur the PDF fails to compile.
Code:
library(kableExtra)
kable(table2.1,format="latex",row.names=NA,align="c",escape=T,
col.names=c("Survey","StationID","Latitude (degrees)",
"Latitude (minutes)","Longitude (degrees)","Longitude (minutes)","Scallops (number)","Scallops (lbs)","Scallops (baskets)","Scallop density (m\textsubscript{2})","Nematode Prevalence (%)"),caption="Catch data for the commercial dredge from the VIMS/Industry cooperative surveys completed during May-July 2018. Nematode prevalence (percentage of scallops sampled at a given station infected with nematodes) is also provided for each station.",longtable = T) %>%
kable_styling(font_size=8,position="center",latex_options =c("repeat_header", "hold_position"),repeat_header_text="Table 2 continued",repeat_header_method="replace") %>%
column_spec(3:6,width = "0.50in") %>%
column_spec(7:9,width = "0.49in") %>%
column_spec(10:11,width = "0.65in")
I can get a PDF to compile with the superscript format using the following code using a fake small dataset:
A <- data.frame(round(replicate(11, runif(2)),2))
rownames(A) <- c("Hola\textsubscript{123}", "Hola\textsubscript{234}")
kable(A,
row.names = T,
col.names=c("Survey","StationID","Latitude (degrees)",
"Latitude (minutes)","Longitude (degrees)","Longitude (minutes)","Scallops (number)","Scallops (lbs)","Scallops (baskets)","Scallop density (m\textsuperscript{2})","Nematode Prevalence"),escape = F)%>%
kable_styling(font_size=8,position="center",latex_options =c("repeat_header", "hold_position"),repeat_header_text="Table 2 continued",repeat_header_method="replace") %>%
column_spec(3:6,width = "0.25in") %>%
column_spec(7:9,width = "0.25in") %>%
column_spec(10:11,width = "0.65in")
@
My data table2.1
is generated from R source code. The structure is:
data.frame': 770 obs. of 11 variables:
$ Survey : Factor w/ 3 levels "CAI_II","MAB",..: 2 2 2 2 2 2 2 2 2 2 ...
$ StationID : int 201801001 201801002 201801003 201801004 201801005 201801006 201801007 201801008 201801009 201801010 ...
$ Latitude_degrees : int 36 36 36 36 36 36 36 36 36 36 ...
$ Latitude_minutes : num 31 36.1 36.9 41.1 42.1 ...
$ Longitude_degrees: int 74 74 74 74 74 74 74 74 74 74 ...
$ Longitude_minutes: num 48.9 44.5 46.6 48.8 45.4 ...
$ Scallop_number : num 0 0 0 0 0 0 0 0 0 0 ...
$ Scallop_lbs : num 0 0 0 0 0 0 0 0 0 0 ...
$ Scallops_baskets : num 0 0 0 0 0 0 0 0 0 0 ...
$ Scallop_density : num 0 0 0 0 0 0 0 0 0 0 ...
$ Nematode : num 0 0 0 0 0 0 0 0 0 0
When I try to run the example code I got to work with table2.1
, the PDF also fails to compile when escape=F
. This leads me to think there is something in table2.1
that is preventing the PDF from compiling, but I'm not sure and looking for advice. I am suing RStudio and pdfLaTex.
tables knitr
add a comment |
I am trying to include m\textsubscript{2}
in a column name using kable
. When I change escape=F
to allow this to occur the PDF fails to compile.
Code:
library(kableExtra)
kable(table2.1,format="latex",row.names=NA,align="c",escape=T,
col.names=c("Survey","StationID","Latitude (degrees)",
"Latitude (minutes)","Longitude (degrees)","Longitude (minutes)","Scallops (number)","Scallops (lbs)","Scallops (baskets)","Scallop density (m\textsubscript{2})","Nematode Prevalence (%)"),caption="Catch data for the commercial dredge from the VIMS/Industry cooperative surveys completed during May-July 2018. Nematode prevalence (percentage of scallops sampled at a given station infected with nematodes) is also provided for each station.",longtable = T) %>%
kable_styling(font_size=8,position="center",latex_options =c("repeat_header", "hold_position"),repeat_header_text="Table 2 continued",repeat_header_method="replace") %>%
column_spec(3:6,width = "0.50in") %>%
column_spec(7:9,width = "0.49in") %>%
column_spec(10:11,width = "0.65in")
I can get a PDF to compile with the superscript format using the following code using a fake small dataset:
A <- data.frame(round(replicate(11, runif(2)),2))
rownames(A) <- c("Hola\textsubscript{123}", "Hola\textsubscript{234}")
kable(A,
row.names = T,
col.names=c("Survey","StationID","Latitude (degrees)",
"Latitude (minutes)","Longitude (degrees)","Longitude (minutes)","Scallops (number)","Scallops (lbs)","Scallops (baskets)","Scallop density (m\textsuperscript{2})","Nematode Prevalence"),escape = F)%>%
kable_styling(font_size=8,position="center",latex_options =c("repeat_header", "hold_position"),repeat_header_text="Table 2 continued",repeat_header_method="replace") %>%
column_spec(3:6,width = "0.25in") %>%
column_spec(7:9,width = "0.25in") %>%
column_spec(10:11,width = "0.65in")
@
My data table2.1
is generated from R source code. The structure is:
data.frame': 770 obs. of 11 variables:
$ Survey : Factor w/ 3 levels "CAI_II","MAB",..: 2 2 2 2 2 2 2 2 2 2 ...
$ StationID : int 201801001 201801002 201801003 201801004 201801005 201801006 201801007 201801008 201801009 201801010 ...
$ Latitude_degrees : int 36 36 36 36 36 36 36 36 36 36 ...
$ Latitude_minutes : num 31 36.1 36.9 41.1 42.1 ...
$ Longitude_degrees: int 74 74 74 74 74 74 74 74 74 74 ...
$ Longitude_minutes: num 48.9 44.5 46.6 48.8 45.4 ...
$ Scallop_number : num 0 0 0 0 0 0 0 0 0 0 ...
$ Scallop_lbs : num 0 0 0 0 0 0 0 0 0 0 ...
$ Scallops_baskets : num 0 0 0 0 0 0 0 0 0 0 ...
$ Scallop_density : num 0 0 0 0 0 0 0 0 0 0 ...
$ Nematode : num 0 0 0 0 0 0 0 0 0 0
When I try to run the example code I got to work with table2.1
, the PDF also fails to compile when escape=F
. This leads me to think there is something in table2.1
that is preventing the PDF from compiling, but I'm not sure and looking for advice. I am suing RStudio and pdfLaTex.
tables knitr
add a comment |
I am trying to include m\textsubscript{2}
in a column name using kable
. When I change escape=F
to allow this to occur the PDF fails to compile.
Code:
library(kableExtra)
kable(table2.1,format="latex",row.names=NA,align="c",escape=T,
col.names=c("Survey","StationID","Latitude (degrees)",
"Latitude (minutes)","Longitude (degrees)","Longitude (minutes)","Scallops (number)","Scallops (lbs)","Scallops (baskets)","Scallop density (m\textsubscript{2})","Nematode Prevalence (%)"),caption="Catch data for the commercial dredge from the VIMS/Industry cooperative surveys completed during May-July 2018. Nematode prevalence (percentage of scallops sampled at a given station infected with nematodes) is also provided for each station.",longtable = T) %>%
kable_styling(font_size=8,position="center",latex_options =c("repeat_header", "hold_position"),repeat_header_text="Table 2 continued",repeat_header_method="replace") %>%
column_spec(3:6,width = "0.50in") %>%
column_spec(7:9,width = "0.49in") %>%
column_spec(10:11,width = "0.65in")
I can get a PDF to compile with the superscript format using the following code using a fake small dataset:
A <- data.frame(round(replicate(11, runif(2)),2))
rownames(A) <- c("Hola\textsubscript{123}", "Hola\textsubscript{234}")
kable(A,
row.names = T,
col.names=c("Survey","StationID","Latitude (degrees)",
"Latitude (minutes)","Longitude (degrees)","Longitude (minutes)","Scallops (number)","Scallops (lbs)","Scallops (baskets)","Scallop density (m\textsuperscript{2})","Nematode Prevalence"),escape = F)%>%
kable_styling(font_size=8,position="center",latex_options =c("repeat_header", "hold_position"),repeat_header_text="Table 2 continued",repeat_header_method="replace") %>%
column_spec(3:6,width = "0.25in") %>%
column_spec(7:9,width = "0.25in") %>%
column_spec(10:11,width = "0.65in")
@
My data table2.1
is generated from R source code. The structure is:
data.frame': 770 obs. of 11 variables:
$ Survey : Factor w/ 3 levels "CAI_II","MAB",..: 2 2 2 2 2 2 2 2 2 2 ...
$ StationID : int 201801001 201801002 201801003 201801004 201801005 201801006 201801007 201801008 201801009 201801010 ...
$ Latitude_degrees : int 36 36 36 36 36 36 36 36 36 36 ...
$ Latitude_minutes : num 31 36.1 36.9 41.1 42.1 ...
$ Longitude_degrees: int 74 74 74 74 74 74 74 74 74 74 ...
$ Longitude_minutes: num 48.9 44.5 46.6 48.8 45.4 ...
$ Scallop_number : num 0 0 0 0 0 0 0 0 0 0 ...
$ Scallop_lbs : num 0 0 0 0 0 0 0 0 0 0 ...
$ Scallops_baskets : num 0 0 0 0 0 0 0 0 0 0 ...
$ Scallop_density : num 0 0 0 0 0 0 0 0 0 0 ...
$ Nematode : num 0 0 0 0 0 0 0 0 0 0
When I try to run the example code I got to work with table2.1
, the PDF also fails to compile when escape=F
. This leads me to think there is something in table2.1
that is preventing the PDF from compiling, but I'm not sure and looking for advice. I am suing RStudio and pdfLaTex.
tables knitr
I am trying to include m\textsubscript{2}
in a column name using kable
. When I change escape=F
to allow this to occur the PDF fails to compile.
Code:
library(kableExtra)
kable(table2.1,format="latex",row.names=NA,align="c",escape=T,
col.names=c("Survey","StationID","Latitude (degrees)",
"Latitude (minutes)","Longitude (degrees)","Longitude (minutes)","Scallops (number)","Scallops (lbs)","Scallops (baskets)","Scallop density (m\textsubscript{2})","Nematode Prevalence (%)"),caption="Catch data for the commercial dredge from the VIMS/Industry cooperative surveys completed during May-July 2018. Nematode prevalence (percentage of scallops sampled at a given station infected with nematodes) is also provided for each station.",longtable = T) %>%
kable_styling(font_size=8,position="center",latex_options =c("repeat_header", "hold_position"),repeat_header_text="Table 2 continued",repeat_header_method="replace") %>%
column_spec(3:6,width = "0.50in") %>%
column_spec(7:9,width = "0.49in") %>%
column_spec(10:11,width = "0.65in")
I can get a PDF to compile with the superscript format using the following code using a fake small dataset:
A <- data.frame(round(replicate(11, runif(2)),2))
rownames(A) <- c("Hola\textsubscript{123}", "Hola\textsubscript{234}")
kable(A,
row.names = T,
col.names=c("Survey","StationID","Latitude (degrees)",
"Latitude (minutes)","Longitude (degrees)","Longitude (minutes)","Scallops (number)","Scallops (lbs)","Scallops (baskets)","Scallop density (m\textsuperscript{2})","Nematode Prevalence"),escape = F)%>%
kable_styling(font_size=8,position="center",latex_options =c("repeat_header", "hold_position"),repeat_header_text="Table 2 continued",repeat_header_method="replace") %>%
column_spec(3:6,width = "0.25in") %>%
column_spec(7:9,width = "0.25in") %>%
column_spec(10:11,width = "0.65in")
@
My data table2.1
is generated from R source code. The structure is:
data.frame': 770 obs. of 11 variables:
$ Survey : Factor w/ 3 levels "CAI_II","MAB",..: 2 2 2 2 2 2 2 2 2 2 ...
$ StationID : int 201801001 201801002 201801003 201801004 201801005 201801006 201801007 201801008 201801009 201801010 ...
$ Latitude_degrees : int 36 36 36 36 36 36 36 36 36 36 ...
$ Latitude_minutes : num 31 36.1 36.9 41.1 42.1 ...
$ Longitude_degrees: int 74 74 74 74 74 74 74 74 74 74 ...
$ Longitude_minutes: num 48.9 44.5 46.6 48.8 45.4 ...
$ Scallop_number : num 0 0 0 0 0 0 0 0 0 0 ...
$ Scallop_lbs : num 0 0 0 0 0 0 0 0 0 0 ...
$ Scallops_baskets : num 0 0 0 0 0 0 0 0 0 0 ...
$ Scallop_density : num 0 0 0 0 0 0 0 0 0 0 ...
$ Nematode : num 0 0 0 0 0 0 0 0 0 0
When I try to run the example code I got to work with table2.1
, the PDF also fails to compile when escape=F
. This leads me to think there is something in table2.1
that is preventing the PDF from compiling, but I'm not sure and looking for advice. I am suing RStudio and pdfLaTex.
tables knitr
tables knitr
edited Mar 6 at 9:21
JouleV
5,30121242
5,30121242
asked Mar 5 at 18:47
user41509user41509
1253
1253
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add a comment |
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